Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16628 and 16629 are separated by 399 nucleotides
16629 and 16630 are separated by 189 nucleotides
16630 and 16631 are separated by 765 nucleotides
16631 and 16632 are separated by 298 nucleotides
mRNA_8260: 16628 - KOG2354 RNA Polymerase C (III) 37 kDa subunit, at 789,466 to 790,634
16628
mRNA_8261: 16629 - KOG0714 Molecular chaperone (DnaJ superfamily), at 791,034 to 792,171
16629
mRNA_8262: 16630 - K01958 PC, pyc pyruvate carboxylase, at 792,361 to 796,882
16630
mRNA_8263: 16631 - KOG1432 Predicted DNA repair exonuclease SIA1, at 797,648 to 800,551
16631
mRNA_8264: 16632 - KOG4754 Predicted phosphoglycerate mutase, at 800,850 to 802,295
16632
Group
Condition
mRNA
_8260
mRNA
_8261
mRNA
_8262
mRNA
_8263
mRNA
_8264
16628
16629
16630
16631
16632
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
-3.2
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
-3.8
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-3.6
-0.5
+0.2
auxotrophy
YNB Glucose
N.D.
-0.5
-3.2
+0.2
-0.0
growth on oleic acid
YNB Glucose
N.D.
-0.2
-3.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
-3.5
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-3.0
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-2.4
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-2.5
+0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-2.9
+0.6
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
-2.0
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-1.9
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
+0.2
-0.2
-0.2
growth on ypd
YPD
N.D.
-0.1
-0.4
+0.5
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.2
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.1
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.4
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
+0.4
+0.0
+0.2
auxotrophy
Dropout Complete
N.D.
-0.4
-0.1
+0.6
+0.8
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.6
+0.3
-0.3
remove
mRNA_8260
plot
remove
mRNA_8261
plot
remove
mRNA_8262
remove
mRNA_8263
plot
remove
mRNA_8264
plot