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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16634 and 16635 are separated by 435 nucleotides
16635 and 16636 are separated by 359 nucleotides
16636 and 16637 are separated by 63 nucleotides
16637 and 16638 are separated by 281 nucleotides
mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804,995 to 806,356
16634
mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806,792 to 809,289
16635
mRNA_8268: 16636 - K11511 APITD1, CENPS, MHF1 centromere protein S, at 809,649 to 810,847
16636
mRNA_8269: 16637 - Hypothetical Protein, at 810,911 to 812,187
16637
mRNA_8270: 16638 - Hypothetical Protein, at 812,469 to 813,656
16638
Group
Condition
mRNA
_8266
mRNA
_8267
mRNA
_8268
mRNA
_8269
mRNA
_8270
16634
16635
16636
16637
16638
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.7
+0.2
-0.6
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
-1.5
-0.0
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.9
-0.8
+0.1
-0.4
+0.5
growth on oleic acid
YNB Oleic Acid
-1.0
-0.2
+0.0
-0.7
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.9
+0.3
-0.1
-0.4
-0.5
auxotrophy
YNB Glucose
-0.8
+0.3
-0.3
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.0
-0.1
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.2
-0.2
+0.3
+0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.0
-0.2
-0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
+0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
-0.5
-0.1
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
+0.0
-0.2
+0.2
growth on oleic acid
YNB Glucose
-0.3
-0.4
-0.2
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.4
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
-1.3
+0.1
+0.3
+0.5
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.1
+0.1
+0.7
-0.1
auxotrophy
Dropout Complete
-0.3
+0.4
-0.0
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.3
-0.1
-0.4
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
+0.6
+0.1
+0.5
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
+0.5
+0.2
+0.4
+0.3
growth on ypd
YPD
+0.3
+0.9
-0.2
+0.4
+0.7
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