Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16642 and 16643 are separated by 212 nucleotides16643 and 16644 are separated by 511 nucleotides16644 and 16645 are separated by 153 nucleotides16645 and 16646 are separated by 261 nucleotides mRNA_8274: 16642 - KOG4080 Mitochondrial ribosomal protein L32, at 819,510 to 820,015 16642 mRNA_8275: 16643 - K00102 dld, LDHD D-lactate dehydrogenase (cytochrome), at 820,228 to 822,470 16643 mRNA_8276: 16644 - K06630 YWHAE 14-3-3 protein epsilon, at 822,982 to 824,358 16644 mRNA_8277: 16645 - Hypothetical Protein, at 824,512 to 825,100 16645 mRNA_8278: 16646 - K16330 K16330 pseudouridylate synthase / pseudouridine kinase, at 825,362 to 828,181 16646
Group Condition mRNA_8274 mRNA_8275 mRNA_8276 mRNA_8277 mRNA_8278
16642 16643 16644 16645 16646
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.4 -0.8 -0.7 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.9 -1.5 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.8 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.3 +0.0 -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -1.1 +0.2 -0.0 +0.0
auxotrophy YNB Glucose N.D. -0.9 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.7 +0.9 -0.8 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.1 +0.7 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 +0.2 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -1.1 +0.5 -0.1 +0.1
auxotrophy Dropout Complete N.D. -0.1 +0.3 -0.8 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.6 -0.7 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.3 +1.3 +0.0 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.5 +0.0 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.2 +0.0 -0.1
growth on oleic acid YNB Glucose N.D. -0.8 +0.4 +0.7 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.2 +0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.5 +0.1 -0.2
growth on ypd YPD N.D. +0.1 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.1 +0.4 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.3 +1.1 +0.7 -0.1
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