Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16652 and 16653 are separated by 493 nucleotides16653 and 16654 are separated by 469 nucleotides16654 and 16655 are separated by 862 nucleotides16655 and 16656 are separated by 569 nucleotides mRNA_8284: 16652 - K07023 K07023 putative hydrolases of HD superfamily, at 839,428 to 840,649 16652 mRNA_8285: 16653 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 841,143 to 845,451 16653 mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845,921 to 849,990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850,853 to 852,932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853,502 to 854,309 16656
Group Condition mRNA_8284 mRNA_8285 mRNA_8286 mRNA_8287 mRNA_8288
16652 16653 16654 16655 16656
facs on lipid accumulation Sorted High BODIPY Gate -0.8 N.D. -0.9 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.5 -0.5 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -1.1 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.4 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.1 -0.8 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. -0.1 -0.1 -0.1
growth on ypd YPD -0.4 N.D. -0.1 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.4 +0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.7 N.D. +0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.3 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.3 +0.2 -0.1
growth on oleic acid YNB Glucose +0.8 N.D. +0.1 -0.6 -0.0
auxotrophy YNB Glucose +0.4 N.D. +0.3 -0.4 +0.2
auxotrophy Dropout Complete +0.4 N.D. +0.0 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 N.D. +0.3 -0.6 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. +0.3 -0.3 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.3 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.5 N.D. +0.4 -0.3 +0.2
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.6 -0.5 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. +0.2 -0.1 +0.5
remove
mRNA_8284
plot
remove
mRNA_8285
plot
remove
mRNA_8286
remove
mRNA_8287
plot
remove
mRNA_8288
plot