Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16655 and 16656 are separated by 569 nucleotides16656 and 16657 are separated by 1761 nucleotides16657 and 16658 are separated by 278 nucleotides16658 and 16659 are separated by 214 nucleotides mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850,853 to 852,932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853,502 to 854,309 16656 mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856,071 to 857,914 16657 mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858,193 to 863,054 16658 mRNA_8291: 16659 - K00851 E2.7.1.12, gntK, idnK gluconokinase, at 863,269 to 864,250 16659
Group Condition mRNA_8287 mRNA_8288 mRNA_8289 mRNA_8290 mRNA_8291
16655 16656 16657 16658 16659
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 -1.5 N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -0.3 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 -0.3 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.0 -0.0 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.3 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.5 +0.5 -0.5 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.2 -0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.6 -0.0 +0.2 N.D. +0.3
growth on ypd YPD +0.0 +0.2 -0.1 N.D. -0.1
auxotrophy YNB Glucose -0.4 +0.2 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.2 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 +0.5 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 +0.2 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 +0.0 N.D. +0.3
auxotrophy Dropout Complete -0.2 +0.3 +0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.0 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 +1.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.2 +1.6 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +0.7 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.1 +1.2 N.D. +0.5
remove
mRNA_8287
plot
remove
mRNA_8288
plot
remove
mRNA_8289
remove
mRNA_8290
plot
remove
mRNA_8291
plot