Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16657 and 16658 are separated by 278 nucleotides
16658 and 16659 are separated by 214 nucleotides
16659 and 16660 are separated by 475 nucleotides
16660 and 16661 are separated by 275 nucleotides
mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856,071 to 857,914
16657
mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858,193 to 863,054
16658
mRNA_8291: 16659 - K00851 E2.7.1.12, gntK, idnK gluconokinase, at 863,269 to 864,250
16659
mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864,726 to 865,561
16660
mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865,837 to 868,084
16661
Group
Condition
mRNA
_8289
mRNA
_8290
mRNA
_8291
mRNA
_8292
mRNA
_8293
16657
16658
16659
16660
16661
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.5
N.D.
-0.0
-0.1
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
-0.4
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.2
-0.4
+0.1
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
-0.1
-0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
-0.4
-0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.2
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
+0.0
-0.1
+0.2
growth on ypd
YPD
-0.1
N.D.
-0.1
+0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
-0.0
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.4
+0.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
-0.2
-0.0
+0.8
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.3
-0.0
+0.2
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
-0.2
+0.2
+0.6
auxotrophy
Dropout Complete
+0.2
N.D.
+0.2
+0.1
+0.4
auxotrophy
YNB Glucose
+0.2
N.D.
-0.0
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
+0.3
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
N.D.
+0.7
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.5
N.D.
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.2
N.D.
+0.5
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.6
N.D.
+0.0
-0.0
+0.6
remove
mRNA_8289
plot
remove
mRNA_8290
plot
remove
mRNA_8291
remove
mRNA_8292
plot
remove
mRNA_8293
plot