Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16658 and 16659 are separated by 214 nucleotides16659 and 16660 are separated by 475 nucleotides16660 and 16661 are separated by 275 nucleotides16661 and 16662 are separated by 924 nucleotides mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858,193 to 863,054 16658 mRNA_8291: 16659 - K00851 E2.7.1.12, gntK, idnK gluconokinase, at 863,269 to 864,250 16659 mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864,726 to 865,561 16660 mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865,837 to 868,084 16661 mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206 16662
Group Condition mRNA_8290 mRNA_8291 mRNA_8292 mRNA_8293 mRNA_8294
16658 16659 16660 16661 16662
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.3 -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.4 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.1 -0.5 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.1 +0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.2 +0.2 +0.2
growth on ypd YPD N.D. -0.1 +0.3 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.1 +0.3 +0.2
growth on oleic acid YNB Glucose N.D. +0.3 -0.0 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.1 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 +0.0 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.3 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.0 +0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.2 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.7 +0.0 +0.3 -0.2
auxotrophy YNB Glucose N.D. -0.0 +0.3 +0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.0 +0.8 +0.4
auxotrophy Dropout Complete N.D. +0.2 +0.1 +0.4 +0.5
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.2 +0.6 +0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.3 +0.4 +0.5
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