Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16659 and 16660 are separated by 475 nucleotides16660 and 16661 are separated by 275 nucleotides16661 and 16662 are separated by 924 nucleotides16662 and 16663 are separated by 444 nucleotides mRNA_8291: 16659 - K00851 E2.7.1.12, gntK, idnK gluconokinase, at 863,269 to 864,250 16659 mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864,726 to 865,561 16660 mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865,837 to 868,084 16661 mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206 16662 mRNA_8295: 16663 - Hypothetical Protein, at 869,651 to 870,841 16663
Group Condition mRNA_8291 mRNA_8292 mRNA_8293 mRNA_8294 mRNA_8295
16659 16660 16661 16662 16663
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 -0.5 +0.6 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3 -0.0 -0.6 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 +0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.1 +0.1 -0.7 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.1 +0.2 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.2 +0.2 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 -0.1 +0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 +0.3 +0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 +0.3 +0.2 +0.1
growth on oleic acid YNB Glucose +0.3 -0.0 +0.2 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.0 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.1 +0.3 -0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.2 +0.3 +0.3 +0.3
growth on ypd YPD -0.1 +0.3 -0.3 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.6 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.0 +0.3 -0.2 +0.2
auxotrophy YNB Glucose -0.0 +0.3 +0.4 +0.3 +0.2
auxotrophy Dropout Complete +0.2 +0.1 +0.4 +0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 +0.4 +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 +0.8 +0.4 +0.4
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.6 +0.6 +0.5
remove
mRNA_8291
plot
remove
mRNA_8292
plot
remove
mRNA_8293
remove
mRNA_8294
plot
remove
mRNA_8295
plot