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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16660 and 16661 are separated by 275 nucleotides
16661 and 16662 are separated by 924 nucleotides
16662 and 16663 are separated by 444 nucleotides
16663 and 16664 are separated by 417 nucleotides
mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864,726 to 865,561
16660
mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865,837 to 868,084
16661
mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206
16662
mRNA_8295: 16663 - Hypothetical Protein, at 869,651 to 870,841
16663
mRNA_8296: 16664 - K19951 TBC1D8_9 TBC1 domain family member 8/9, at 871,259 to 875,299
16664
Group
Condition
mRNA
_8292
mRNA
_8293
mRNA
_8294
mRNA
_8295
mRNA
_8296
16660
16661
16662
16663
16664
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
-0.6
+0.2
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
+0.6
-1.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.3
+0.2
-0.0
-1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
-0.1
+0.0
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.1
-0.1
+0.3
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
-0.7
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.6
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.3
-0.2
+0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
+0.2
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.3
-0.2
+0.2
+0.1
growth on oleic acid
YNB Glucose
-0.0
+0.2
-0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.6
-0.2
+0.4
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
+0.2
+0.1
-0.1
growth on ypd
YPD
+0.3
-0.3
+0.2
+0.6
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.3
+0.3
+0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.4
+0.5
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
+0.4
+0.2
+0.3
auxotrophy
Dropout Complete
+0.1
+0.4
+0.5
+0.2
-0.2
auxotrophy
YNB Glucose
+0.3
+0.4
+0.3
+0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.8
+0.4
+0.4
-0.2
growth on ricinoleic acid
YNB Glucose
+0.2
+0.6
+0.6
+0.5
-0.5
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