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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16662 and 16663 are separated by 444 nucleotides
16663 and 16664 are separated by 417 nucleotides
16664 and 16665 are separated by 1827 nucleotides
16665 and 16666 are separated by 313 nucleotides
mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206
16662
mRNA_8295: 16663 - Hypothetical Protein, at 869,651 to 870,841
16663
mRNA_8296: 16664 - K19951 TBC1D8_9 TBC1 domain family member 8/9, at 871,259 to 875,299
16664
mRNA_8297: 16665 - Hypothetical Protein, at 877,127 to 877,627
16665
mRNA_8298: 16666 - K02858 ribB, RIB3 3,4-dihydroxy 2-butanone 4-phosphate synthase, at 877,941 to 878,924
16666
Group
Condition
mRNA
_8294
mRNA
_8295
mRNA
_8296
mRNA
_8297
mRNA
_8298
16662
16663
16664
16665
16666
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.0
-1.4
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-1.0
-0.3
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.2
-0.7
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.0
-1.0
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
+0.2
-0.3
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.3
-0.6
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.0
-0.0
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
+0.1
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
+0.0
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.4
-0.4
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.6
-0.1
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.3
-0.6
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.1
-0.4
+0.2
N.D.
auxotrophy
YNB Glucose
+0.3
+0.2
-0.3
+0.0
N.D.
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.2
+0.3
-0.2
N.D.
growth on ypd
YPD
+0.2
+0.6
-0.3
+0.1
N.D.
auxotrophy
Dropout Complete
+0.5
+0.2
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.6
+0.5
-0.5
+0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.4
-0.2
+0.4
N.D.
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