Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16666 and 16667 are separated by 627 nucleotides16667 and 16668 are separated by 52 nucleotides16668 and 16669 are separated by 144 nucleotides16669 and 16670 are separated by 204 nucleotides mRNA_8298: 16666 - K02858 ribB, RIB3 3,4-dihydroxy 2-butanone 4-phosphate synthase, at 877,941 to 878,924 16666 mRNA_8299: 16667 - Hypothetical Protein, at 879,552 to 881,168 16667 mRNA_8300: 16668 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13640,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SMART-Prolyl 4-hydroxylase alpha subunit homologues.-SM00702, at 881,221 to 882,082 16668 mRNA_8301: 16669 - K20361 USO1 intracellular protein transport protein USO1, at 882,227 to 887,090 16669 mRNA_8302: 16670 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 887,295 to 889,058 16670
Group Condition mRNA_8298 mRNA_8299 mRNA_8300 mRNA_8301 mRNA_8302
16666 16667 16668 16669 16670
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 +0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.2 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 -0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.1 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 +0.3 N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.2 N.D. -0.3
growth on oleic acid YNB Glucose N.D. +0.0 -0.0 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.0 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.1 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 -0.0 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.0 N.D. +0.1
auxotrophy YNB Glucose N.D. +0.1 +0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.1 N.D. +0.0
auxotrophy Dropout Complete N.D. +0.4 -0.0 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 N.D. +0.2
growth on ypd YPD N.D. +0.3 +0.2 N.D. +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.0 N.D. +0.3
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