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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16669 and 16670 are separated by 204 nucleotides
16670 and 16671 are separated by 1358 nucleotides
16671 and 16672 are separated by 544 nucleotides
16672 and 16673 are separated by 491 nucleotides
mRNA_8301: 16669 - K20361 USO1 intracellular protein transport protein USO1, at 882,227 to 887,090
16669
mRNA_8302: 16670 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 887,295 to 889,058
16670
mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890,417 to 892,180
16671
mRNA_8304: 16672 - K01336 E3.4.21.48 cerevisin, at 892,725 to 894,788
16672
mRNA_8305: 16673 - Hypothetical Protein, at 895,280 to 896,635
16673
Group
Condition
mRNA
_8301
mRNA
_8302
mRNA
_8303
mRNA
_8304
mRNA
_8305
16669
16670
16671
16672
16673
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.5
-0.3
-2.2
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.5
-0.5
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.6
-0.2
-0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.1
-1.3
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.2
-0.5
-0.5
growth on ypd
YPD
N.D.
+0.0
+0.0
+0.0
-1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
-0.5
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
+0.2
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.5
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
-0.3
-0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.2
-0.3
+0.4
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.1
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.6
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.4
-0.2
+0.1
+0.2
auxotrophy
YNB Glucose
N.D.
+0.1
-0.2
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.1
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
+0.0
+0.2
auxotrophy
Dropout Complete
N.D.
+0.0
-0.2
+0.4
+0.6
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
+0.1
+0.2
+0.7
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