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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16671 and 16672 are separated by 544 nucleotides
16672 and 16673 are separated by 491 nucleotides
16673 and 16674 are separated by 414 nucleotides
16674 and 16675 are separated by 390 nucleotides
mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890,417 to 892,180
16671
mRNA_8304: 16672 - K01336 E3.4.21.48 cerevisin, at 892,725 to 894,788
16672
mRNA_8305: 16673 - Hypothetical Protein, at 895,280 to 896,635
16673
mRNA_8306: 16674 - Hypothetical Protein, at 897,050 to 897,488
16674
mRNA_8307: 16675 - Hypothetical Protein, at 897,879 to 899,223
16675
Group
Condition
mRNA
_8303
mRNA
_8304
mRNA
_8305
mRNA
_8306
mRNA
_8307
16671
16672
16673
16674
16675
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.3
+0.2
-0.1
-1.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.3
+0.3
-0.4
-1.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-2.2
+0.1
+0.1
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.5
-0.5
+0.1
-0.7
growth on oleic acid
YNB Oleic Acid
-0.5
-0.3
-0.5
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
+0.4
-0.1
-1.0
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.3
-0.0
-0.7
auxotrophy
YNB Glucose
-0.2
+0.2
+0.2
+0.1
-1.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.1
-0.2
+0.1
-0.5
growth on ypd
YPD
+0.0
+0.0
-1.2
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.2
-0.2
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
-0.3
-0.2
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.5
-0.0
+0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.4
-0.1
+0.0
+0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.2
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+0.7
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
-0.2
-0.5
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.0
+0.2
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
-0.1
+0.1
+1.3
auxotrophy
Dropout Complete
-0.2
+0.4
+0.6
+0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
+0.1
+0.3
+1.3
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