Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16675 and 16676 are separated by 323 nucleotides16676 and 16677 are separated by 107 nucleotides16677 and 16678 are separated by 426 nucleotides16678 and 16679 are separated by 356 nucleotides mRNA_8307: 16675 - Hypothetical Protein, at 897,879 to 899,223 16675 mRNA_8308: 16676 - ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 899,547 to 900,613 16676 mRNA_8309: 16677 - K06965 PELO, DOM34, pelA protein pelota, at 900,721 to 902,755 16677 mRNA_8310: 16678 - K18752 TNPO1, IPO2, KPNB2 transportin-1, at 903,182 to 906,312 16678 mRNA_8311: 16679 - K03016 RPB8, POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3, at 906,669 to 907,618 16679
Group Condition mRNA_8307 mRNA_8308 mRNA_8309 mRNA_8310 mRNA_8311
16675 16676 16677 16678 16679
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose -1.3 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.7 +0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.5 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 +0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.7 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 N.D. N.D. N.D.
growth on ypd YPD +0.3 -0.4 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.4 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.6 +0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.3 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +1.3 +0.2 N.D. N.D. N.D.
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