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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16683 and 16684 are separated by 108 nucleotides
16684 and 16685 are separated by 604 nucleotides
16685 and 16686 are separated by 315 nucleotides
16686 and 16687 are separated by 513 nucleotides
mRNA_8315: 16683 - Hypothetical Protein, at 921,677 to 922,300
16683
mRNA_8316: 16684 - KOG2923 Uncharacterized conserved protein, at 922,409 to 922,756
16684
mRNA_8317: 16685 - Hypothetical Protein, at 923,361 to 925,022
16685
mRNA_8318: 16686 - ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF54236, at 925,338 to 930,210
16686
mRNA_8319: 16687 - HMMPfam-Protein of unknown function (DUF2370)-PF10176, at 930,724 to 932,736
16687
Group
Condition
mRNA
_8315
mRNA
_8316
mRNA
_8317
mRNA
_8318
mRNA
_8319
16683
16684
16685
16686
16687
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-1.7
-1.0
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-1.1
-0.5
-0.3
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.2
-0.4
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-1.8
-0.7
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-1.3
-0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-1.7
-0.9
+0.1
+0.3
auxotrophy
YNB Glucose
-0.6
-1.8
-0.0
+0.3
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-1.5
-0.4
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-1.1
-0.3
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.3
-1.5
-0.5
+0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-1.8
-0.5
+0.8
-0.1
growth on oleic acid
YNB Glucose
+0.2
-1.7
-0.4
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-1.7
+0.3
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-1.7
+0.3
+0.2
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.6
+0.1
-0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.7
-0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.8
-0.4
+0.8
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.8
+0.1
-0.0
+0.1
auxotrophy
Dropout Complete
-0.2
-0.9
+0.1
+0.5
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.1
-0.0
+0.0
-0.0
growth on ypd
YPD
+0.2
-1.0
+1.0
-0.0
-0.1
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