Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16701 and 16702 are separated by 902 nucleotides
16702 and 16703 are separated by 693 nucleotides
16703 and 16704 are separated by 346 nucleotides
16704 and 16705 are separated by 420 nucleotides
mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958,557 to 960,459
16701
mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961,362 to 964,238
16702
mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964,932 to 965,872
16703
mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966,219 to 967,737
16704
mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968,158 to 970,145
16705
Group
Condition
mRNA
_8333
mRNA
_8334
mRNA
_8335
mRNA
_8336
mRNA
_8337
16701
16702
16703
16704
16705
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.6
-0.3
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+0.1
-0.2
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.1
-0.1
-0.3
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.2
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.3
-0.1
-0.1
growth on ypd
YPD
-0.2
-0.1
-0.1
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.3
-0.1
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.0
+0.0
+0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.6
-0.2
+0.2
+0.2
growth on oleic acid
YNB Glucose
-0.2
+0.4
+0.1
+0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
-0.1
+0.4
-0.1
growth on oleic acid
YNB Oleic Acid
-0.4
+0.5
+0.1
+0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
-0.1
+0.3
-0.0
auxotrophy
YNB Glucose
-0.2
+0.6
+0.2
-0.0
+0.0
growth on ricinoleic acid
YNB Glucose
+0.3
+0.6
+0.1
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+1.2
-0.1
+0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.6
+0.0
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.5
+0.0
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+1.1
+0.1
+0.2
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.8
+0.2
+0.3
+0.2
auxotrophy
Dropout Complete
+0.1
+1.0
+0.2
+0.1
+0.0
remove
mRNA_8333
plot
remove
mRNA_8334
plot
remove
mRNA_8335
remove
mRNA_8336
plot
remove
mRNA_8337
plot