Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16702 and 16703 are separated by 693 nucleotides16703 and 16704 are separated by 346 nucleotides16704 and 16705 are separated by 420 nucleotides16705 and 16706 are separated by 532 nucleotides mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961,362 to 964,238 16702 mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964,932 to 965,872 16703 mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966,219 to 967,737 16704 mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968,158 to 970,145 16705 mRNA_8338: 16706 - Hypothetical Protein, at 970,678 to 971,361 16706
Group Condition mRNA_8334 mRNA_8335 mRNA_8336 mRNA_8337 mRNA_8338
16702 16703 16704 16705 16706
growth on ricinoleic acid YNB Ricinoleic Acid +1.1 +0.1 +0.2 -0.5 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.3 -0.1 +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 -0.1 +0.0 -0.4 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.6 +0.1 +0.2 -0.2 -1.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 +0.0 -0.1 +0.2
growth on ypd YPD -0.1 -0.1 +0.1 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.2 +0.2 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.1 -0.2 +0.4
auxotrophy YNB Glucose +0.6 +0.2 -0.0 +0.0 -0.7
growth on oleic acid YNB Glucose +0.4 +0.1 +0.2 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.0 +0.2 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.3 +0.3 +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.4 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.0 +0.1 +0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.5 +0.1 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.1 +0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.0 +0.1 +0.1 -0.1
auxotrophy Dropout Complete +1.0 +0.2 +0.1 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 +0.2 +0.3 +0.2 -0.1
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