Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16703 and 16704 are separated by 346 nucleotides
16704 and 16705 are separated by 420 nucleotides
16705 and 16706 are separated by 532 nucleotides
16706 and 16707 are separated by 1076 nucleotides
mRNA_8335: 16703 - HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895, at 964,932 to 965,872
16703
mRNA_8336: 16704 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 966,219 to 967,737
16704
mRNA_8337: 16705 - K01267 DNPEP aspartyl aminopeptidase, at 968,158 to 970,145
16705
mRNA_8338: 16706 - Hypothetical Protein, at 970,678 to 971,361
16706
mRNA_8339: 16707 - K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase, at 972,438 to 973,571
16707
Group
Condition
mRNA
_8335
mRNA
_8336
mRNA
_8337
mRNA
_8338
mRNA
_8339
16703
16704
16705
16706
16707
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.2
-0.5
-1.9
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
-0.4
-1.5
+0.4
auxotrophy
YNB Glucose
+0.2
-0.0
+0.0
-0.7
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
-0.2
-1.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.2
+0.1
-0.7
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.2
+0.2
+0.3
-0.8
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.1
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.2
+0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.1
+0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.1
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
-0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
-0.1
+0.1
+0.6
growth on ypd
YPD
-0.1
+0.1
-0.2
+0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.0
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
+0.2
-0.0
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.3
+0.2
-0.1
-0.2
auxotrophy
Dropout Complete
+0.2
+0.1
+0.0
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.4
-0.1
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.1
+0.1
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
+0.3
+0.5
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.1
+0.0
+0.6
+0.7
remove
mRNA_8335
plot
remove
mRNA_8336
plot
remove
mRNA_8337
remove
mRNA_8338
plot
remove
mRNA_8339
plot