Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16708 and 16709 are separated by 200 nucleotides16709 and 16710 are separated by 275 nucleotides16710 and 16711 are separated by 842 nucleotides16711 and 16712 are separated by 845 nucleotides mRNA_8340: 16708 - K03254 EIF3A translation initiation factor 3 subunit A, at 973,687 to 977,357 16708 mRNA_8341: 16709 - K14569 BMS1 ribosome biogenesis protein BMS1, at 977,558 to 981,587 16709 mRNA_8342: 16710 - Hypothetical Protein, at 981,863 to 982,243 16710 mRNA_8343: 16711 - Hypothetical Protein, at 983,086 to 983,598 16711 mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984,444 to 989,069 16712
Group Condition mRNA_8340 mRNA_8341 mRNA_8342 mRNA_8343 mRNA_8344
16708 16709 16710 16711 16712
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -1.0 -0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.7 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.6 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.7 +0.4
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. -0.4 +0.1
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.1 -0.0
auxotrophy YNB Glucose N.D. N.D. N.D. -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.7 -0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.2 -0.1
auxotrophy Dropout Complete N.D. N.D. N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.8 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.9 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.2 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.9 -0.3
growth on ypd YPD N.D. N.D. N.D. +0.5 +0.4
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