Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16709 and 16710 are separated by 275 nucleotides16710 and 16711 are separated by 842 nucleotides16711 and 16712 are separated by 845 nucleotides16712 and 16713 are separated by 146 nucleotides mRNA_8341: 16709 - K14569 BMS1 ribosome biogenesis protein BMS1, at 977,558 to 981,587 16709 mRNA_8342: 16710 - Hypothetical Protein, at 981,863 to 982,243 16710 mRNA_8343: 16711 - Hypothetical Protein, at 983,086 to 983,598 16711 mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984,444 to 989,069 16712 mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989,216 to 990,816 16713
Group Condition mRNA_8341 mRNA_8342 mRNA_8343 mRNA_8344 mRNA_8345
16709 16710 16711 16712 16713
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.0 -0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.6 -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 -0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.7 -0.2 +0.4
growth on oleic acid YNB Glucose N.D. N.D. -0.1 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.4 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.5 -0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.4 +0.1 -0.1
auxotrophy YNB Glucose N.D. N.D. -0.0 +0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.7 +0.4 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 +0.6 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.1 +0.4 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.7 -0.6 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 +0.2 +0.3
auxotrophy Dropout Complete N.D. N.D. +0.1 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.8 -0.5 +0.5
growth on ypd YPD N.D. N.D. +0.5 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.9 -0.5 +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.9 -0.3 +0.7
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