Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16709 and 16710 are separated by 275 nucleotides
16710 and 16711 are separated by 842 nucleotides
16711 and 16712 are separated by 845 nucleotides
16712 and 16713 are separated by 146 nucleotides
mRNA_8341: 16709 - K14569 BMS1 ribosome biogenesis protein BMS1, at 977,558 to 981,587
16709
mRNA_8342: 16710 - Hypothetical Protein, at 981,863 to 982,243
16710
mRNA_8343: 16711 - Hypothetical Protein, at 983,086 to 983,598
16711
mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984,444 to 989,069
16712
mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989,216 to 990,816
16713
Group
Condition
mRNA
_8341
mRNA
_8342
mRNA
_8343
mRNA
_8344
mRNA
_8345
16709
16710
16711
16712
16713
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-1.0
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.6
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.4
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.7
-0.2
+0.4
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.1
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.4
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.5
-0.2
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.4
+0.1
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
-0.0
+0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.7
+0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.2
+0.6
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.2
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.1
+0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
-0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.7
-0.6
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.2
+0.2
+0.3
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
+0.2
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.8
-0.5
+0.5
growth on ypd
YPD
N.D.
N.D.
+0.5
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.9
-0.5
+0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.9
-0.3
+0.7
remove
mRNA_8341
plot
remove
mRNA_8342
plot
remove
mRNA_8343
remove
mRNA_8344
plot
remove
mRNA_8345
plot