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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16711 and 16712 are separated by 845 nucleotides
16712 and 16713 are separated by 146 nucleotides
16713 and 16714 are separated by 195 nucleotides
16714 and 16715 are separated by 348 nucleotides
mRNA_8343: 16711 - Hypothetical Protein, at 983,086 to 983,598
16711
mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984,444 to 989,069
16712
mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989,216 to 990,816
16713
mRNA_8346: 16714 - Hypothetical Protein, at 991,012 to 994,561
16714
mRNA_8347: 16715 - Hypothetical Protein, at 994,910 to 995,448
16715
Group
Condition
mRNA
_8343
mRNA
_8344
mRNA
_8345
mRNA
_8346
mRNA
_8347
16711
16712
16713
16714
16715
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
+0.3
-0.9
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
-0.3
+0.1
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.7
-0.2
+0.4
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.1
-0.2
-0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.6
-0.3
+0.1
+0.3
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.3
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.4
+0.1
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.2
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.4
+0.1
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.6
-0.4
-0.3
+0.1
auxotrophy
YNB Glucose
-0.0
+0.0
-0.3
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.3
-0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
-0.5
+0.5
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
-0.6
+0.5
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.4
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.4
+0.0
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.2
+0.3
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
-0.5
+0.9
-0.4
-0.1
auxotrophy
Dropout Complete
+0.1
+0.2
+0.4
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.9
-0.3
+0.7
-0.2
+0.1
growth on ypd
YPD
+0.5
+0.4
+0.0
+0.5
+0.3
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