Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16712 and 16713 are separated by 146 nucleotides
16713 and 16714 are separated by 195 nucleotides
16714 and 16715 are separated by 348 nucleotides
16715 and 16716 overlap by 2 nucleotides
mRNA_8344: 16712 - K20308 TRAPPC11 trafficking protein particle complex subunit 11, at 984,444 to 989,069
16712
mRNA_8345: 16713 - K00062 E1.1.1.116 D-arabinose 1-dehydrogenase, at 989,216 to 990,816
16713
mRNA_8346: 16714 - Hypothetical Protein, at 991,012 to 994,561
16714
mRNA_8347: 16715 - Hypothetical Protein, at 994,910 to 995,448
16715
mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995,447 to 998,474
16716
Group
Condition
mRNA
_8344
mRNA
_8345
mRNA
_8346
mRNA
_8347
mRNA
_8348
16712
16713
16714
16715
16716
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.3
-0.9
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.4
-0.3
+0.1
-1.1
auxotrophy
YNB Glucose
+0.0
-0.3
+0.3
-0.1
-1.0
growth on oleic acid
YNB Glucose
-0.0
-0.3
+0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
-0.2
+0.1
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
-0.1
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
+0.2
-0.2
-0.7
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
-0.2
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.5
-0.1
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
+0.9
-0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.7
-0.2
+0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.1
+0.0
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.5
+0.0
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.0
+0.3
-0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
-0.2
+0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
+0.3
-0.1
+0.1
auxotrophy
Dropout Complete
+0.2
+0.4
+0.4
-0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.2
+0.2
-0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.4
+0.2
-0.1
+0.0
growth on ypd
YPD
+0.4
+0.0
+0.5
+0.3
+0.2
remove
mRNA_8344
plot
remove
mRNA_8345
plot
remove
mRNA_8346
remove
mRNA_8347
plot
remove
mRNA_8348
plot