Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16715 and 16716 overlap by 2 nucleotides16716 and 16717 are separated by 692 nucleotides16717 and 16718 are separated by 1085 nucleotides16718 and 16719 are separated by 117 nucleotides mRNA_8347: 16715 - Hypothetical Protein, at 994,910 to 995,448 16715 mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995,447 to 998,474 16716 mRNA_8349: 16717 - K05349 bglX beta-glucosidase, at 999,167 to 1,002,495 16717 mRNA_8350: 16718 - K11397 EAF1, VID21 chromatin modification-related protein VID21, at 1,003,581 to 1,006,700 16718 mRNA_8351: 16719 - K14303 NUP160, NUP120 nuclear pore complex protein Nup160, at 1,006,818 to 1,012,012 16719
Group Condition mRNA_8347 mRNA_8348 mRNA_8349 mRNA_8350 mRNA_8351
16715 16716 16717 16718 16719
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 -0.1 N.D. -2.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.1 -0.1 N.D. -1.9
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.4 +0.2 N.D. -2.2
auxotrophy Dropout Complete -0.1 -0.7 +0.1 N.D. -1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 -0.1 N.D. -0.9
growth on oleic acid YNB Glucose -0.1 -0.5 +0.1 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.3 N.D. -0.1
auxotrophy YNB Glucose -0.1 -1.0 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.7 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.1 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.6 +0.0 N.D. -0.1
growth on ypd YPD +0.3 +0.2 +0.1 N.D. -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 -0.0 N.D. +0.4
growth on oleic acid YNB Oleic Acid -0.0 -0.2 +0.1 N.D. +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 +0.1 N.D. +1.0
growth on ricinoleic acid YNB Glucose +0.0 -0.4 +0.2 N.D. +0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 +0.1 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 +0.3 N.D. +1.5
remove
mRNA_8347
plot
remove
mRNA_8348
plot
remove
mRNA_8349
remove
mRNA_8350
plot
remove
mRNA_8351
plot