Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16716 and 16717 are separated by 692 nucleotides16717 and 16718 are separated by 1085 nucleotides16718 and 16719 are separated by 117 nucleotides16719 and 16720 are separated by 967 nucleotides mRNA_8348: 16716 - K05349 bglX beta-glucosidase, at 995,447 to 998,474 16716 mRNA_8349: 16717 - K05349 bglX beta-glucosidase, at 999,167 to 1,002,495 16717 mRNA_8350: 16718 - K11397 EAF1, VID21 chromatin modification-related protein VID21, at 1,003,581 to 1,006,700 16718 mRNA_8351: 16719 - K14303 NUP160, NUP120 nuclear pore complex protein Nup160, at 1,006,818 to 1,012,012 16719 mRNA_8352: 16720 - Hypothetical Protein, at 1,012,980 to 1,013,679 16720
Group Condition mRNA_8348 mRNA_8349 mRNA_8350 mRNA_8351 mRNA_8352
16716 16717 16718 16719 16720
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 N.D. -2.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.1 N.D. -1.9 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 N.D. -2.2 +0.2
auxotrophy Dropout Complete -0.7 +0.1 N.D. -1.5 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 N.D. -0.9 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 N.D. -0.1 -0.3
growth on oleic acid YNB Glucose -0.5 +0.1 N.D. -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.6 -0.2
auxotrophy YNB Glucose -1.0 +0.1 N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.0 N.D. -0.1 +0.2
growth on ypd YPD +0.2 +0.1 N.D. -0.9 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.1 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 N.D. -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 N.D. +0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. +0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.1 N.D. +1.0 +0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.2 N.D. +0.8 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 N.D. +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 N.D. +1.5 +0.1
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