Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16718 and 16719 are separated by 117 nucleotides16719 and 16720 are separated by 967 nucleotides16720 and 16721 are separated by 705 nucleotides16721 and 16722 are separated by 69 nucleotides mRNA_8350: 16718 - K11397 EAF1, VID21 chromatin modification-related protein VID21, at 1,003,581 to 1,006,700 16718 mRNA_8351: 16719 - K14303 NUP160, NUP120 nuclear pore complex protein Nup160, at 1,006,818 to 1,012,012 16719 mRNA_8352: 16720 - Hypothetical Protein, at 1,012,980 to 1,013,679 16720 mRNA_8353: 16721 - BLAST Clampless protein 1 [Leucoagaricus sp. SymC.cos], at 1,014,385 to 1,015,330 16721 mRNA_8354: 16722 - K07734 paiB transcriptional regulator, at 1,015,400 to 1,016,161 16722
Group Condition mRNA_8350 mRNA_8351 mRNA_8352 mRNA_8353 mRNA_8354
16718 16719 16720 16721 16722
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -2.5 -0.0 -0.8 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.9 -0.1 -0.6 -0.1
auxotrophy Dropout Complete N.D. -1.5 +0.2 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -2.2 +0.2 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.9 -0.0 +0.1 +0.1
growth on ypd YPD N.D. -0.9 +0.2 +0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.3 -0.4 +0.2
growth on oleic acid YNB Glucose N.D. -0.6 +0.1 +0.1 -0.2
auxotrophy YNB Glucose N.D. +0.1 +0.1 +0.0 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 -0.2 +0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.7 +0.1 -0.2 -0.9
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.2 +0.7 -0.7
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.2 +0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.3 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.0 -0.1 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.0 +0.2 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.1 +0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.5 +0.1 +0.0 -0.6
growth on ricinoleic acid YNB Glucose N.D. +0.8 +0.2 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 -0.1 +0.4 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 -0.0 +0.8 +0.2
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