Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16728 and 16729 are separated by 284 nucleotides16729 and 16730 are separated by 558 nucleotides16730 and 16731 are separated by 553 nucleotides16731 and 16732 are separated by 122 nucleotides mRNA_8360: 16728 - K02739 PSMB7 20S proteasome subunit beta 2, at 1,031,213 to 1,032,623 16728 mRNA_8361: 16729 - K06640 ATR serine/threonine-protein kinase ATR, at 1,032,908 to 1,038,730 16729 mRNA_8362: 16730 - Hypothetical Protein, at 1,039,289 to 1,041,924 16730 mRNA_8363: 16731 - KOG1693 emp24/gp25L/p24 family of membrane trafficking proteins, at 1,042,478 to 1,043,371 16731 mRNA_8364: 16732 - K01488 add, ADA adenosine deaminase, at 1,043,494 to 1,044,920 16732
Group Condition mRNA_8360 mRNA_8361 mRNA_8362 mRNA_8363 mRNA_8364
16728 16729 16730 16731 16732
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. -1.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. N.D. -0.9 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. N.D. -0.8 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. N.D. -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. N.D. +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. N.D. +1.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. +0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. N.D. +0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. +0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.8 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. +0.7 +0.1
auxotrophy YNB Glucose +0.1 N.D. N.D. +1.2 -0.0
growth on ypd YPD +0.3 N.D. N.D. +1.1 -0.1
growth on oleic acid YNB Glucose +0.4 N.D. N.D. +0.9 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. +0.9 +0.3
auxotrophy Dropout Complete +0.4 N.D. N.D. +1.5 -0.3
growth on oleic acid YNB Oleic Acid +0.7 N.D. N.D. +0.7 +0.2
growth on ricinoleic acid YNB Glucose +0.3 N.D. N.D. +1.2 +0.3
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