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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16731 and 16732 are separated by 122 nucleotides
16732 and 16733 are separated by 361 nucleotides
16733 and 16734 are separated by 185 nucleotides
16734 and 16735 are separated by 180 nucleotides
mRNA_8363: 16731 - KOG1693 emp24/gp25L/p24 family of membrane trafficking proteins, at 1,042,478 to 1,043,371
16731
mRNA_8364: 16732 - K01488 add, ADA adenosine deaminase, at 1,043,494 to 1,044,920
16732
mRNA_8365: 16733 - Hypothetical Protein, at 1,045,282 to 1,045,452
16733
mRNA_8366: 16734 - BLAST similar to An01g09190 [Aspergillus kawachii IFO 4308], at 1,045,638 to 1,046,770
16734
mRNA_8367: 16735 - Hypothetical Protein, at 1,046,951 to 1,048,222
16735
Group
Condition
mRNA
_8363
mRNA
_8364
mRNA
_8365
mRNA
_8366
mRNA
_8367
16731
16732
16733
16734
16735
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.1
-2.4
-1.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.0
-0.7
-1.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.3
-0.4
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.3
-0.5
+0.4
+0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+1.2
-0.2
-1.0
-1.1
-0.3
growth on ypd
YPD
+1.1
-0.1
-0.5
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.0
-0.3
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.3
+0.1
+0.7
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
-0.3
+0.9
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.2
+0.3
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.9
-0.1
+0.4
-0.3
-0.3
auxotrophy
YNB Glucose
+1.2
-0.0
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.8
+0.3
-0.3
+0.5
-0.2
auxotrophy
Dropout Complete
+1.5
-0.3
+0.5
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.7
+0.1
+1.0
-0.4
-0.3
growth on ricinoleic acid
YNB Glucose
+1.2
+0.3
-0.7
+0.6
-0.2
growth on oleic acid
YNB Glucose
+0.9
+0.1
+0.7
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.7
+0.2
+0.6
+0.5
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
+0.3
-0.2
+1.2
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.2
+1.0
+0.7
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
-0.2
+0.2
+1.5
-0.5
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