Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16737 and 16738 are separated by 423 nucleotides16738 and 16739 are separated by 169 nucleotides16739 and 16740 are separated by 216 nucleotides16740 and 16741 are separated by 183 nucleotides mRNA_8369: 16737 - HMMPfam-Transient receptor potential (TRP) ion channel-PF06011, at 1,050,307 to 1,054,065 16737 mRNA_8370: 16738 - K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2, at 1,054,489 to 1,055,817 16738 mRNA_8371: 16739 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 1,055,987 to 1,057,436 16739 mRNA_8372: 16740 - KOG1729 FYVE finger containing protein, at 1,057,653 to 1,060,208 16740 mRNA_8373: 16741 - KOG0504 FOG Ankyrin repeat, at 1,060,392 to 1,061,446 16741
Group Condition mRNA_8369 mRNA_8370 mRNA_8371 mRNA_8372 mRNA_8373
16737 16738 16739 16740 16741
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.1 -1.5 +0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.5 -1.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.7 -2.0 +0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.5 -1.0 -0.9 -0.7
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.3 -2.6 +0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 -3.1 +0.1 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 -1.6 -0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.5 -0.0 -1.1 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 -0.7 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 -0.8 +0.1 +0.3
growth on oleic acid YNB Glucose +0.0 +0.1 -0.5 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 -1.3 +0.2 +0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.3 -0.6 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.5 -0.6 -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.8 -0.4 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.4 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.2 -0.2 +0.1 +0.2
auxotrophy YNB Glucose -0.4 +0.7 +0.9 -0.4 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 +1.0 +0.7 -0.2 +0.3
auxotrophy Dropout Complete -0.2 +0.4 +1.2 -0.2 +0.3
growth on ypd YPD +0.1 -0.2 +2.6 +0.0 -0.1
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