Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16742 and 16743 are separated by 793 nucleotides16743 and 16744 are separated by 218 nucleotides16744 and 16745 are separated by 147 nucleotides16745 and 16746 are separated by 941 nucleotides mRNA_8374: 16742 - KOG0053 Cystathionine beta-lyases/cystathionine gamma-synthases, at 1,061,726 to 1,063,499 16742 mRNA_8375: 16743 - HMMPfam-Velvet factor-PF11754, at 1,064,293 to 1,065,552 16743 mRNA_8376: 16744 - Hypothetical Protein, at 1,065,771 to 1,066,578 16744 mRNA_8377: 16745 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 1,066,726 to 1,069,498 16745 mRNA_8378: 16746 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 1,070,440 to 1,071,948 16746
Group Condition mRNA_8374 mRNA_8375 mRNA_8376 mRNA_8377 mRNA_8378
16742 16743 16744 16745 16746
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.1 -2.3 -0.8 N.D.
growth on ypd YPD -0.5 +0.0 -0.7 -0.8 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 -0.7 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -1.4 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 -0.4 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.2 -0.2 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.6 +0.1 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 -0.8 +0.3 N.D.
growth on oleic acid YNB Glucose -0.3 +0.3 -0.4 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.2 +0.1 N.D.
auxotrophy Dropout Complete -0.6 +0.0 +0.0 +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 -0.0 +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.1 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.1 -0.3 -0.1 N.D.
auxotrophy YNB Glucose -0.4 -0.2 +0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 +0.6 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 +0.1 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.1 -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4 +1.0 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.2 +0.3 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +1.5 +0.1 N.D.
remove
mRNA_8374
plot
remove
mRNA_8375
plot
remove
mRNA_8376
remove
mRNA_8377
plot
remove
mRNA_8378
plot