Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16743 and 16744 are separated by 218 nucleotides16744 and 16745 are separated by 147 nucleotides16745 and 16746 are separated by 941 nucleotides16746 and 16747 are separated by 1028 nucleotides mRNA_8375: 16743 - HMMPfam-Velvet factor-PF11754, at 1,064,293 to 1,065,552 16743 mRNA_8376: 16744 - Hypothetical Protein, at 1,065,771 to 1,066,578 16744 mRNA_8377: 16745 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 1,066,726 to 1,069,498 16745 mRNA_8378: 16746 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 1,070,440 to 1,071,948 16746 mRNA_8379: 16747 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 1,072,977 to 1,073,638 16747
Group Condition mRNA_8375 mRNA_8376 mRNA_8377 mRNA_8378 mRNA_8379
16743 16744 16745 16746 16747
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -2.3 -0.8 N.D. N.D.
growth on ypd YPD +0.0 -0.7 -0.8 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -1.4 +0.5 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.7 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 -0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.3 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.8 +0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.3 -0.4 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 +0.5 N.D. N.D.
auxotrophy Dropout Complete +0.0 +0.0 +0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.4 N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.3 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.6 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +1.0 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.3 +0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +1.5 +0.1 N.D. N.D.
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