Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16744 and 16745 are separated by 147 nucleotides16745 and 16746 are separated by 941 nucleotides16746 and 16747 are separated by 1028 nucleotides16747 and 16748 are separated by 52 nucleotides mRNA_8376: 16744 - Hypothetical Protein, at 1,065,771 to 1,066,578 16744 mRNA_8377: 16745 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 1,066,726 to 1,069,498 16745 mRNA_8378: 16746 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 1,070,440 to 1,071,948 16746 mRNA_8379: 16747 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 1,072,977 to 1,073,638 16747 mRNA_8380: 16748 - KOG4197 FOG PPR repeat, at 1,073,691 to 1,078,543 16748
Group Condition mRNA_8376 mRNA_8377 mRNA_8378 mRNA_8379 mRNA_8380
16744 16745 16746 16747 16748
facs on lipid accumulation Sorted Low BODIPY Gate -2.3 -0.8 N.D. N.D. N.D.
growth on ypd YPD -0.7 -0.8 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -1.4 +0.5 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.3 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.4 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.4 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.5 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.0 +0.5 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.5 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.3 +0.5 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.7 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.5 +0.1 N.D. N.D. N.D.
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