Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16748 and 16749 are separated by 214 nucleotides16749 and 16750 are separated by 278 nucleotides16750 and 16751 are separated by 56 nucleotides16751 and 16752 are separated by 650 nucleotides mRNA_8380: 16748 - KOG4197 FOG PPR repeat, at 1,073,691 to 1,078,543 16748 mRNA_8381: 16749 - Hypothetical Protein, at 1,078,758 to 1,080,099 16749 mRNA_8382: 16750 - K00799 GST, gst glutathione S-transferase, at 1,080,378 to 1,081,397 16750 mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1,081,454 to 1,084,319 16751 mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1,084,970 to 1,085,744 16752
Group Condition mRNA_8380 mRNA_8381 mRNA_8382 mRNA_8383 mRNA_8384
16748 16749 16750 16751 16752
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.1 -0.2 -0.5
auxotrophy YNB Glucose N.D. -0.1 -0.2 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.2 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.2 +0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 -0.6 +0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.1 -0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 -0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.2 +0.2 -0.1
growth on oleic acid YNB Glucose N.D. -0.0 -0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.1 +0.1
growth on ypd YPD N.D. -0.4 -0.1 +0.1 +0.3
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.0 +0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.3 -0.1 -0.1
auxotrophy Dropout Complete N.D. +0.2 +0.2 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.0 -0.0 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.0 +0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.7 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.6 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.7 -0.1 +0.2
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