Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16748 and 16749 are separated by 214 nucleotides
16749 and 16750 are separated by 278 nucleotides
16750 and 16751 are separated by 56 nucleotides
16751 and 16752 are separated by 650 nucleotides
mRNA_8380: 16748 - KOG4197 FOG PPR repeat, at 1,073,691 to 1,078,543
16748
mRNA_8381: 16749 - Hypothetical Protein, at 1,078,758 to 1,080,099
16749
mRNA_8382: 16750 - K00799 GST, gst glutathione S-transferase, at 1,080,378 to 1,081,397
16750
mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1,081,454 to 1,084,319
16751
mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1,084,970 to 1,085,744
16752
Group
Condition
mRNA
_8380
mRNA
_8381
mRNA
_8382
mRNA
_8383
mRNA
_8384
16748
16749
16750
16751
16752
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
-0.2
-0.5
auxotrophy
YNB Glucose
N.D.
-0.1
-0.2
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
-0.2
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.3
-0.2
+0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.6
+0.2
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
-0.1
-0.0
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.0
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.2
+0.2
-0.1
growth on oleic acid
YNB Glucose
N.D.
-0.0
-0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.1
-0.1
+0.1
growth on ypd
YPD
N.D.
-0.4
-0.1
+0.1
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
+0.0
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
+0.3
-0.1
-0.1
auxotrophy
Dropout Complete
N.D.
+0.2
+0.2
-0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.1
+0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.0
-0.0
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.0
+0.0
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.7
-0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.6
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.7
-0.1
+0.2
remove
mRNA_8380
plot
remove
mRNA_8381
plot
remove
mRNA_8382
remove
mRNA_8383
plot
remove
mRNA_8384
plot