Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16751 and 16752 are separated by 650 nucleotides16752 and 16753 are separated by 153 nucleotides16753 and 16754 are separated by 1834 nucleotides16754 and 16755 are separated by 1279 nucleotides mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1,081,454 to 1,084,319 16751 mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1,084,970 to 1,085,744 16752 mRNA_8385: 16753 - HMMPfam-Protein of unknown function, DUF608-PF04685,HMMPfam-Bacterial alpha-L-rhamnosidase-PF05592,SUPERFAMILY--SSF48208, at 1,085,898 to 1,088,411 16753 mRNA_8386: 16754 - K02868 RP-L11e, RPL11 large subunit ribosomal protein L11e, at 1,090,246 to 1,091,683 16754 mRNA_8387: 16755 - Hypothetical Protein, at 1,092,963 to 1,094,682 16755
Group Condition mRNA_8383 mRNA_8384 mRNA_8385 mRNA_8386 mRNA_8387
16751 16752 16753 16754 16755
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.5 -0.2 N.D. +0.0
auxotrophy YNB Glucose -0.3 -0.1 -0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.2 -0.5 N.D. -0.2
auxotrophy Dropout Complete -0.2 +0.0 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.0 -0.4 +0.1 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 -0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -0.3 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.1 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.1 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.4 -0.2 N.D. +0.1
growth on oleic acid YNB Glucose +0.1 -0.1 -0.2 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 -0.2 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.2 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.0 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.3 -0.2 N.D. +0.1
growth on ypd YPD +0.1 +0.3 +0.3 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.5 +0.1 N.D. +0.0
remove
mRNA_8383
plot
remove
mRNA_8384
plot
remove
mRNA_8385
remove
mRNA_8386
plot
remove
mRNA_8387
plot