Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16752 and 16753 are separated by 153 nucleotides16753 and 16754 are separated by 1834 nucleotides16754 and 16755 are separated by 1279 nucleotides16755 and 16756 are separated by 108 nucleotides mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1,084,970 to 1,085,744 16752 mRNA_8385: 16753 - HMMPfam-Protein of unknown function, DUF608-PF04685,HMMPfam-Bacterial alpha-L-rhamnosidase-PF05592,SUPERFAMILY--SSF48208, at 1,085,898 to 1,088,411 16753 mRNA_8386: 16754 - K02868 RP-L11e, RPL11 large subunit ribosomal protein L11e, at 1,090,246 to 1,091,683 16754 mRNA_8387: 16755 - Hypothetical Protein, at 1,092,963 to 1,094,682 16755 mRNA_8388: 16756 - Hypothetical Protein, at 1,094,791 to 1,097,376 16756
Group Condition mRNA_8384 mRNA_8385 mRNA_8386 mRNA_8387 mRNA_8388
16752 16753 16754 16755 16756
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.5 N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.3 N.D. -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 N.D. -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 N.D. +0.1 -0.0
growth on oleic acid YNB Glucose -0.1 -0.2 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.1 N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. +0.1 -0.1
auxotrophy YNB Glucose -0.1 -0.1 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.2 N.D. +0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 N.D. -0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 N.D. +0.1 -0.1
auxotrophy Dropout Complete +0.0 -0.2 N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 N.D. -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 N.D. +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. +0.1 +0.2
growth on ypd YPD +0.3 +0.3 N.D. -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 N.D. +0.0 +0.1
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