Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16758 and 16759 are separated by 124 nucleotides16759 and 16760 are separated by 262 nucleotides16760 and 16761 are separated by 66 nucleotides16761 and 16762 are separated by 513 nucleotides mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1,099,792 to 1,101,469 16758 mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1,101,594 to 1,103,958 16759 mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1,104,221 to 1,108,536 16760 mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1,108,603 to 1,114,039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1,114,553 to 1,119,513 16762
Group Condition mRNA_8390 mRNA_8391 mRNA_8392 mRNA_8393 mRNA_8394
16758 16759 16760 16761 16762
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.7 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 -0.5 +0.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 -0.1 -0.1 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -1.7 -0.2 +0.9
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 -0.7 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.0 -0.2 +0.2 -0.6
auxotrophy YNB Glucose +0.3 -0.3 -0.9 +0.2 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 +0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 +0.0 +0.3 -0.1
growth on ypd YPD -0.1 -0.1 -0.3 +0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 -0.7 -0.1 +1.3
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.3 -0.3 +0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.4 -0.0 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.2 +0.7 +0.0 -0.1
auxotrophy Dropout Complete +0.5 -0.2 -0.6 +0.2 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 +0.2 +0.2 +0.2
growth on oleic acid YNB Glucose -0.1 +0.1 +0.0 +0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.2 -0.2 +0.2 +0.7
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.1 +0.3 +1.0
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