Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16759 and 16760 are separated by 262 nucleotides16760 and 16761 are separated by 66 nucleotides16761 and 16762 are separated by 513 nucleotides16762 and 16763 are separated by 105 nucleotides mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1,101,594 to 1,103,958 16759 mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1,104,221 to 1,108,536 16760 mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1,108,603 to 1,114,039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1,114,553 to 1,119,513 16762 mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1,119,619 to 1,120,614 16763
Group Condition mRNA_8391 mRNA_8392 mRNA_8393 mRNA_8394 mRNA_8395
16759 16760 16761 16762 16763
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.7 -0.1 -0.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.5 +0.0 -1.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.1 -1.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 +0.2 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.3 -0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.5 -0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 +0.1 +0.5 -0.7
auxotrophy YNB Glucose -0.3 -0.9 +0.2 +0.6 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.7 -0.2 +0.9 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.7 +0.2 -0.0 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.7 +0.0 -0.1 -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.0 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 +0.3 -0.1 +0.1
growth on ypd YPD -0.1 -0.3 +0.1 +0.6 +0.1
auxotrophy Dropout Complete -0.2 -0.6 +0.2 +0.7 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 +0.2 +0.7 +0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.4 -0.0 +0.7 +0.7
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 +0.2 +0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.7 -0.1 +1.3 +0.7
growth on oleic acid YNB Glucose +0.1 +0.0 +0.2 +0.6 +0.8
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.3 +1.0 +1.1
remove
mRNA_8391
plot
remove
mRNA_8392
plot
remove
mRNA_8393
remove
mRNA_8394
plot
remove
mRNA_8395
plot