Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16760 and 16761 are separated by 66 nucleotides16761 and 16762 are separated by 513 nucleotides16762 and 16763 are separated by 105 nucleotides16763 and 16764 are separated by 729 nucleotides mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1,104,221 to 1,108,536 16760 mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1,108,603 to 1,114,039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1,114,553 to 1,119,513 16762 mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1,119,619 to 1,120,614 16763 mRNA_8396: 16764 - HMMPfam-Ribosomal protein S8-PF00410,SUPERFAMILY--SSF56047, at 1,121,344 to 1,121,811 16764
Group Condition mRNA_8392 mRNA_8393 mRNA_8394 mRNA_8395 mRNA_8396
16760 16761 16762 16763 16764
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -1.3 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.0 -1.0 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 -0.7 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 -0.6 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.3 -0.1 -0.9 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 +0.5 -0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.3 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.2 +0.9 +0.8 N.D.
auxotrophy YNB Glucose -0.9 +0.2 +0.6 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.2 -0.0 +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.0 -0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 -0.1 +0.1 N.D.
growth on ypd YPD -0.3 +0.1 +0.6 +0.1 N.D.
auxotrophy Dropout Complete -0.6 +0.2 +0.7 +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 +0.2 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.0 +0.7 +0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.7 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.1 +1.3 +0.7 N.D.
growth on oleic acid YNB Glucose +0.0 +0.2 +0.6 +0.8 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +1.0 +1.1 N.D.
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