Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16762 and 16763 are separated by 105 nucleotides
16763 and 16764 are separated by 729 nucleotides
16764 and 16765 are separated by 350 nucleotides
16765 and 16766 are separated by 213 nucleotides
mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1,114,553 to 1,119,513
16762
mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1,119,619 to 1,120,614
16763
mRNA_8396: 16764 - HMMPfam-Ribosomal protein S8-PF00410,SUPERFAMILY--SSF56047, at 1,121,344 to 1,121,811
16764
mRNA_8397: 16765 - K02946 RP-S10, MRPS10, rpsJ small subunit ribosomal protein S10, at 1,122,162 to 1,123,126
16765
mRNA_8398: 16766 - HMMPfam-Histone deacetylation protein Rxt3-PF08642, at 1,123,340 to 1,126,588
16766
Group
Condition
mRNA
_8394
mRNA
_8395
mRNA
_8396
mRNA
_8397
mRNA
_8398
16762
16763
16764
16765
16766
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.3
-0.1
N.D.
N.D.
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.1
N.D.
N.D.
-1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.4
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.1
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.9
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.7
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.1
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose
+0.6
-0.0
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.4
N.D.
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.3
N.D.
N.D.
+0.3
growth on ypd
YPD
+0.6
+0.1
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.7
+0.2
N.D.
N.D.
-0.0
auxotrophy
Dropout Complete
+0.7
+0.4
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Glucose
+0.7
+0.7
N.D.
N.D.
+0.0
growth on oleic acid
YNB Glucose
+0.6
+0.8
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
+0.8
N.D.
N.D.
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.3
+0.7
N.D.
N.D.
+0.5
growth on oleic acid
YNB Oleic Acid
+1.0
+1.1
N.D.
N.D.
+0.4
remove
mRNA_8394
plot
remove
mRNA_8395
plot
remove
mRNA_8396
remove
mRNA_8397
plot
remove
mRNA_8398
plot