Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16766 and 16767 are separated by 2118 nucleotides16767 and 16768 are separated by 304 nucleotides16768 and 16769 are separated by 233 nucleotides16769 and 16770 are separated by 118 nucleotides mRNA_8398: 16766 - HMMPfam-Histone deacetylation protein Rxt3-PF08642, at 1,123,340 to 1,126,588 16766 mRNA_8399: 16767 - KOG1721 FOG Zn-finger, at 1,128,707 to 1,128,957 16767 mRNA_8400: 16768 - K12189 VPS25, EAP20 ESCRT-II complex subunit VPS25, at 1,129,262 to 1,130,136 16768 mRNA_8401: 16769 - K16315 GSG2 serine/threonine-protein kinase haspin, at 1,130,370 to 1,132,967 16769 mRNA_8402: 16770 - K07579 K07579 putative methylase, at 1,133,086 to 1,134,230 16770
Group Condition mRNA_8398 mRNA_8399 mRNA_8400 mRNA_8401 mRNA_8402
16766 16767 16768 16769 16770
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -2.2 -0.3 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 N.D. -0.8 -0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -2.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.7 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.0 N.D. -0.8 +0.3 -0.0
growth on ypd YPD +0.1 N.D. -1.3 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.3 +0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.5 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.3 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.3 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.5 +0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.0 N.D. -0.5 -0.4 +0.8
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.5 -0.0 +0.9
auxotrophy YNB Glucose -0.0 N.D. -0.3 -0.2 +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.3 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.1 -0.4 +0.5
growth on oleic acid YNB Glucose +0.2 N.D. +0.7 -0.2 +0.0
growth on oleic acid YNB Oleic Acid +0.4 N.D. +1.0 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.3 -0.2 +0.5
auxotrophy Dropout Complete +0.3 N.D. +0.5 -0.1 +0.6
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