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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16767 and 16768 are separated by 304 nucleotides
16768 and 16769 are separated by 233 nucleotides
16769 and 16770 are separated by 118 nucleotides
16770 and 16771 are separated by 436 nucleotides
mRNA_8399: 16767 - KOG1721 FOG Zn-finger, at 1,128,707 to 1,128,957
16767
mRNA_8400: 16768 - K12189 VPS25, EAP20 ESCRT-II complex subunit VPS25, at 1,129,262 to 1,130,136
16768
mRNA_8401: 16769 - K16315 GSG2 serine/threonine-protein kinase haspin, at 1,130,370 to 1,132,967
16769
mRNA_8402: 16770 - K07579 K07579 putative methylase, at 1,133,086 to 1,134,230
16770
mRNA_8403: 16771 - K08829 MAK male germ cell-associated kinase, at 1,134,667 to 1,138,585
16771
Group
Condition
mRNA
_8399
mRNA
_8400
mRNA
_8401
mRNA
_8402
mRNA
_8403
16767
16768
16769
16770
16771
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.8
-0.4
-0.0
-2.9
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-2.2
-0.3
-0.7
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-2.2
-0.1
+0.4
-1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.7
-0.1
-0.6
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.8
+0.3
-0.0
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.4
+0.5
-1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
-0.2
+0.5
-1.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
-0.2
-0.4
-0.7
growth on ypd
YPD
N.D.
-1.3
+0.3
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
+0.1
+0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.1
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
-0.4
+0.8
-0.5
growth on oleic acid
YNB Oleic Acid
N.D.
+1.0
-0.4
-0.1
-0.9
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.1
-0.5
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.5
+0.0
-0.0
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.5
+0.1
-0.1
+0.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.5
-0.0
+0.9
-0.0
auxotrophy
YNB Glucose
N.D.
-0.3
-0.2
+0.7
+0.0
auxotrophy
Dropout Complete
N.D.
+0.5
-0.1
+0.6
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.7
-0.2
+0.0
+0.3
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