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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16775 and 16776 are separated by 289 nucleotides
16776 and 16777 are separated by 105 nucleotides
16777 and 16778 are separated by 461 nucleotides
16778 and 16779 are separated by 145 nucleotides
mRNA_8407: 16775 - K18914 FDXR adrenodoxin-NADP+ reductase, at 1,144,436 to 1,146,110
16775
mRNA_8408: 16776 - Hypothetical Protein, at 1,146,400 to 1,148,528
16776
mRNA_8409: 16777 - K09667 OGT protein O-GlcNAc transferase, at 1,148,634 to 1,155,172
16777
mRNA_8410: 16778 - K12761 SNF1 carbon catabolite-derepressing protein kinase, at 1,155,634 to 1,159,160
16778
mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1,159,306 to 1,160,640
16779
Group
Condition
mRNA
_8407
mRNA
_8408
mRNA
_8409
mRNA
_8410
mRNA
_8411
16775
16776
16777
16778
16779
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.0
-2.8
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.0
-0.0
-2.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.4
+0.1
-2.8
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-0.3
-0.9
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
-0.7
-0.6
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.0
-1.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.2
-0.7
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
+0.2
-1.0
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.1
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
-0.1
-0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.2
+0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
-0.3
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-0.1
+0.0
-0.2
growth on oleic acid
YNB Glucose
N.D.
+0.2
-0.0
-0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.0
+0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.5
-0.2
-0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.1
-0.4
+0.2
auxotrophy
YNB Glucose
N.D.
+0.4
-0.1
+0.1
+0.1
auxotrophy
Dropout Complete
N.D.
+0.5
-0.2
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.0
+0.4
+0.4
growth on ypd
YPD
N.D.
+0.2
-0.1
+0.4
+0.2
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