Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16775 and 16776 are separated by 289 nucleotides16776 and 16777 are separated by 105 nucleotides16777 and 16778 are separated by 461 nucleotides16778 and 16779 are separated by 145 nucleotides mRNA_8407: 16775 - K18914 FDXR adrenodoxin-NADP+ reductase, at 1,144,436 to 1,146,110 16775 mRNA_8408: 16776 - Hypothetical Protein, at 1,146,400 to 1,148,528 16776 mRNA_8409: 16777 - K09667 OGT protein O-GlcNAc transferase, at 1,148,634 to 1,155,172 16777 mRNA_8410: 16778 - K12761 SNF1 carbon catabolite-derepressing protein kinase, at 1,155,634 to 1,159,160 16778 mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1,159,306 to 1,160,640 16779
Group Condition mRNA_8407 mRNA_8408 mRNA_8409 mRNA_8410 mRNA_8411
16775 16776 16777 16778 16779
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.0 -2.8 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.0 -2.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 +0.1 -2.8 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -0.3 -0.9 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.7 -0.6 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.0 -1.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.2 -0.7 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 -1.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 -0.1 -0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -0.2 +0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.1 +0.0 -0.2
growth on oleic acid YNB Glucose N.D. +0.2 -0.0 -0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.0 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -0.2 -0.0 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.5 +0.1 -0.4 +0.2
auxotrophy YNB Glucose N.D. +0.4 -0.1 +0.1 +0.1
auxotrophy Dropout Complete N.D. +0.5 -0.2 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.0 +0.4 +0.4
growth on ypd YPD N.D. +0.2 -0.1 +0.4 +0.2
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