Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16776 and 16777 are separated by 105 nucleotides16777 and 16778 are separated by 461 nucleotides16778 and 16779 are separated by 145 nucleotides16779 and 16780 are separated by 77 nucleotides mRNA_8408: 16776 - Hypothetical Protein, at 1,146,400 to 1,148,528 16776 mRNA_8409: 16777 - K09667 OGT protein O-GlcNAc transferase, at 1,148,634 to 1,155,172 16777 mRNA_8410: 16778 - K12761 SNF1 carbon catabolite-derepressing protein kinase, at 1,155,634 to 1,159,160 16778 mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1,159,306 to 1,160,640 16779 mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1,160,718 to 1,162,780 16780
Group Condition mRNA_8408 mRNA_8409 mRNA_8410 mRNA_8411 mRNA_8412
16776 16777 16778 16779 16780
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -2.7 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 -2.8 -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 -2.8 -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 -0.9 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.7 -0.6 +0.3 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -1.0 +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 -1.1 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.4 +0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.7 +0.4 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2 +0.0 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.1 +0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 -0.2 +0.2 +0.3
growth on oleic acid YNB Glucose +0.2 -0.0 -0.2 +0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.3 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.2 -0.0 +0.1 +0.0
auxotrophy Dropout Complete +0.5 -0.2 +0.1 +0.2 -0.1
auxotrophy YNB Glucose +0.4 -0.1 +0.1 +0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.5 +0.1 -0.4 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.4 +0.4 +0.1
growth on ypd YPD +0.2 -0.1 +0.4 +0.2 +0.0
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