Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16778 and 16779 are separated by 145 nucleotides16779 and 16780 are separated by 77 nucleotides16780 and 16781 are separated by 44 nucleotides16781 and 16782 are separated by 134 nucleotides mRNA_8410: 16778 - K12761 SNF1 carbon catabolite-derepressing protein kinase, at 1,155,634 to 1,159,160 16778 mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1,159,306 to 1,160,640 16779 mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1,160,718 to 1,162,780 16780 mRNA_8413: 16781 - KOG4484 Uncharacterized conserved protein, at 1,162,825 to 1,164,107 16781 mRNA_8414: 16782 - Hypothetical Protein, at 1,164,242 to 1,165,926 16782
Group Condition mRNA_8410 mRNA_8411 mRNA_8412 mRNA_8413 mRNA_8414
16778 16779 16780 16781 16782
growth on ricinoleic acid YNB Methylricinoleic Acid -2.8 -0.0 +0.2 -0.7 N.D.
growth on oleic acid YNB Oleic Acid -2.7 +0.1 -0.0 -0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -2.8 -0.0 -0.0 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.0 +0.0 -1.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.4 +0.0 -1.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.2 +0.3 -0.3 N.D.
growth on oleic acid YNB Glucose -0.2 +0.3 +0.0 -0.8 N.D.
auxotrophy Dropout Complete +0.1 +0.2 -0.1 -0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 -0.0 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.3 -0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.0 -0.5 N.D.
growth on ypd YPD +0.4 +0.2 +0.0 -0.9 N.D.
auxotrophy YNB Glucose +0.1 +0.1 +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 +0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.4 +0.5 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 +0.3 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.3 +0.3 +0.8 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.5 +0.1 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 +0.1 +1.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.4 +0.1 +0.9 N.D.
remove
mRNA_8410
plot
remove
mRNA_8411
plot
remove
mRNA_8412
remove
mRNA_8413
plot
remove
mRNA_8414
plot