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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16779 and 16780 are separated by 77 nucleotides
16780 and 16781 are separated by 44 nucleotides
16781 and 16782 are separated by 134 nucleotides
16782 and 16783 are separated by 271 nucleotides
mRNA_8411: 16779 - KOG2898 Predicted phosphate acyltransferase, contains PlsC domain, at 1,159,306 to 1,160,640
16779
mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1,160,718 to 1,162,780
16780
mRNA_8413: 16781 - KOG4484 Uncharacterized conserved protein, at 1,162,825 to 1,164,107
16781
mRNA_8414: 16782 - Hypothetical Protein, at 1,164,242 to 1,165,926
16782
mRNA_8415: 16783 - Hypothetical Protein, at 1,166,198 to 1,166,736
16783
Group
Condition
mRNA
_8411
mRNA
_8412
mRNA
_8413
mRNA
_8414
mRNA
_8415
16779
16780
16781
16782
16783
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.0
-1.4
N.D.
-0.2
growth on ypd
YPD
+0.2
+0.0
-0.9
N.D.
-0.5
growth on oleic acid
YNB Glucose
+0.3
+0.0
-0.8
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
-0.0
-0.7
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.2
-0.7
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.3
-0.3
N.D.
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.0
-1.0
N.D.
+0.0
auxotrophy
Dropout Complete
+0.2
-0.1
-0.7
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
-0.3
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
-0.5
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.0
-0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
+0.2
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
+0.2
+0.3
-0.6
N.D.
+0.3
auxotrophy
YNB Glucose
+0.1
+0.1
-0.0
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.3
+0.3
N.D.
-0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
+0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.5
+0.2
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.3
+0.8
N.D.
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.1
+0.7
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+1.0
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.1
+0.9
N.D.
-0.0
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