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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16780 and 16781 are separated by 44 nucleotides
16781 and 16782 are separated by 134 nucleotides
16782 and 16783 are separated by 271 nucleotides
16783 and 16784 are separated by 718 nucleotides
mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1,160,718 to 1,162,780
16780
mRNA_8413: 16781 - KOG4484 Uncharacterized conserved protein, at 1,162,825 to 1,164,107
16781
mRNA_8414: 16782 - Hypothetical Protein, at 1,164,242 to 1,165,926
16782
mRNA_8415: 16783 - Hypothetical Protein, at 1,166,198 to 1,166,736
16783
mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1,167,455 to 1,171,070
16784
Group
Condition
mRNA
_8412
mRNA
_8413
mRNA
_8414
mRNA
_8415
mRNA
_8416
16780
16781
16782
16783
16784
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-1.4
N.D.
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.0
-0.8
N.D.
-0.4
-0.0
growth on ypd
YPD
+0.0
-0.9
N.D.
-0.5
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-1.0
N.D.
+0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.7
N.D.
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.3
N.D.
-0.8
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.7
N.D.
-0.1
+0.1
auxotrophy
Dropout Complete
-0.1
-0.7
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.5
N.D.
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
N.D.
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.2
N.D.
-0.6
-0.1
auxotrophy
YNB Glucose
+0.1
-0.0
N.D.
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.3
N.D.
-0.4
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
N.D.
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
-0.6
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.2
N.D.
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.2
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.8
N.D.
-0.7
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.7
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.9
N.D.
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+1.0
N.D.
+0.1
-0.1
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