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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16782 and 16783 are separated by 271 nucleotides
16783 and 16784 are separated by 718 nucleotides
16784 and 16785 are separated by 391 nucleotides
16785 and 16786 are separated by 725 nucleotides
mRNA_8414: 16782 - Hypothetical Protein, at 1,164,242 to 1,165,926
16782
mRNA_8415: 16783 - Hypothetical Protein, at 1,166,198 to 1,166,736
16783
mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1,167,455 to 1,171,070
16784
mRNA_8417: 16785 - Hypothetical Protein, at 1,171,462 to 1,173,303
16785
mRNA_8418: 16786 - HMMPfam-Cgr1 family-PF03879, at 1,174,029 to 1,174,652
16786
Group
Condition
mRNA
_8414
mRNA
_8415
mRNA
_8416
mRNA
_8417
mRNA
_8418
16782
16783
16784
16785
16786
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.8
+0.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.6
-0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
-0.0
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.7
+0.0
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.1
-0.2
N.D.
growth on ypd
YPD
N.D.
-0.5
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.1
+0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.4
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.1
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.1
-0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
+0.1
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
-0.0
-0.1
N.D.
auxotrophy
YNB Glucose
N.D.
+0.1
-0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
+0.1
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.1
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.0
-0.1
N.D.
auxotrophy
Dropout Complete
N.D.
+0.2
+0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
-0.0
+0.0
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
+0.1
-0.2
N.D.
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