Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16783 and 16784 are separated by 718 nucleotides
16784 and 16785 are separated by 391 nucleotides
16785 and 16786 are separated by 725 nucleotides
16786 and 16787 are separated by 734 nucleotides
mRNA_8415: 16783 - Hypothetical Protein, at 1,166,198 to 1,166,736
16783
mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1,167,455 to 1,171,070
16784
mRNA_8417: 16785 - Hypothetical Protein, at 1,171,462 to 1,173,303
16785
mRNA_8418: 16786 - HMMPfam-Cgr1 family-PF03879, at 1,174,029 to 1,174,652
16786
mRNA_8419: 16787 - K14310 NUP205, NUP192 nuclear pore complex protein Nup205, at 1,175,387 to 1,181,685
16787
Group
Condition
mRNA
_8415
mRNA
_8416
mRNA
_8417
mRNA
_8418
mRNA
_8419
16783
16784
16785
16786
16787
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.1
-0.2
N.D.
-1.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.0
-0.0
N.D.
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
+0.0
+0.1
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
+0.0
-0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.1
+0.0
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.2
N.D.
-0.3
growth on ypd
YPD
-0.5
+0.2
-0.2
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
+0.0
N.D.
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.2
N.D.
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.0
-0.1
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.4
-0.0
+0.1
N.D.
+0.6
auxotrophy
Dropout Complete
+0.2
+0.1
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
+0.0
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.2
N.D.
+0.6
growth on ricinoleic acid
YNB Glucose
+0.3
+0.1
-0.2
N.D.
+0.2
auxotrophy
YNB Glucose
+0.1
-0.1
-0.0
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.1
-0.2
N.D.
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
-0.1
N.D.
+0.8
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
+0.0
N.D.
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
-0.1
N.D.
+0.9
remove
mRNA_8415
plot
remove
mRNA_8416
plot
remove
mRNA_8417
remove
mRNA_8418
plot
remove
mRNA_8419
plot