Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16784 and 16785 are separated by 391 nucleotides
16785 and 16786 are separated by 725 nucleotides
16786 and 16787 are separated by 734 nucleotides
16787 and 16788 are separated by 125 nucleotides
mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1,167,455 to 1,171,070
16784
mRNA_8417: 16785 - Hypothetical Protein, at 1,171,462 to 1,173,303
16785
mRNA_8418: 16786 - HMMPfam-Cgr1 family-PF03879, at 1,174,029 to 1,174,652
16786
mRNA_8419: 16787 - K14310 NUP205, NUP192 nuclear pore complex protein Nup205, at 1,175,387 to 1,181,685
16787
mRNA_8420: 16788 - SUPERFAMILY--SSF52047, at 1,181,811 to 1,183,583
16788
Group
Condition
mRNA
_8416
mRNA
_8417
mRNA
_8418
mRNA
_8419
mRNA
_8420
16784
16785
16786
16787
16788
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
N.D.
-1.9
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.0
N.D.
-0.7
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
N.D.
-0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
N.D.
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
N.D.
-0.3
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
N.D.
+0.2
-0.2
auxotrophy
Dropout Complete
+0.1
-0.1
N.D.
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
N.D.
+0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.1
N.D.
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.1
N.D.
+0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
N.D.
+0.3
-0.1
growth on ypd
YPD
+0.2
-0.2
N.D.
+0.3
-0.1
auxotrophy
YNB Glucose
-0.1
-0.0
N.D.
+0.5
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
N.D.
+0.6
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
N.D.
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.0
N.D.
+0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
N.D.
+0.7
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
N.D.
+0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
N.D.
+0.8
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
N.D.
+0.9
-0.2
growth on oleic acid
YNB Glucose
-0.0
+0.1
N.D.
+0.6
+0.0
remove
mRNA_8416
plot
remove
mRNA_8417
plot
remove
mRNA_8418
remove
mRNA_8419
plot
remove
mRNA_8420
plot