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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16793 and 16794 are separated by 839 nucleotides
16794 and 16795 are separated by 576 nucleotides
16795 and 16796 are separated by 48 nucleotides
16796 and 16797 are separated by 180 nucleotides
mRNA_8425: 16793 - K06674 SMC2 structural maintenance of chromosome 2, at 1,196,484 to 1,200,962
16793
mRNA_8426: 16794 - Hypothetical Protein, at 1,201,802 to 1,203,211
16794
mRNA_8427: 16795 - K11462 EED polycomb protein EED, at 1,203,788 to 1,206,558
16795
mRNA_8428: 16796 - KOG3808 Uncharacterized conserved protein, at 1,206,607 to 1,207,294
16796
mRNA_8429: 16797 - Hypothetical Protein, at 1,207,475 to 1,209,032
16797
Group
Condition
mRNA
_8425
mRNA
_8426
mRNA
_8427
mRNA
_8428
mRNA
_8429
16793
16794
16795
16796
16797
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.7
+0.2
-1.4
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.0
-0.8
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+0.4
-0.8
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.0
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.8
+0.1
+0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.0
+0.4
-0.7
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
+0.4
-0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.1
-0.1
+0.0
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.0
-0.4
+0.3
growth on ypd
YPD
N.D.
+0.4
+0.2
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.6
+0.4
-0.9
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.0
-0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.1
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
+0.1
-0.5
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.1
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.0
+0.5
-0.0
auxotrophy
Dropout Complete
N.D.
+0.4
+0.2
-0.0
-0.3
auxotrophy
YNB Glucose
N.D.
+0.3
+0.2
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.5
+0.2
+0.2
-0.1
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