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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16797 and 16798 are separated by 529 nucleotides
16798 and 16799 are separated by 235 nucleotides
16799 and 16800 are separated by 108 nucleotides
16800 and 16801 are separated by 433 nucleotides
mRNA_8429: 16797 - Hypothetical Protein, at 1,207,475 to 1,209,032
16797
mRNA_8430: 16798 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1,209,562 to 1,211,995
16798
mRNA_8431: 16799 - K15105 SLC25A12_13, AGC solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13, at 1,212,231 to 1,215,205
16799
mRNA_8432: 16800 - Hypothetical Protein, at 1,215,314 to 1,218,685
16800
mRNA_8433: 16801 - SUPERFAMILY--SSF54909, at 1,219,119 to 1,219,808
16801
Group
Condition
mRNA
_8429
mRNA
_8430
mRNA
_8431
mRNA
_8432
mRNA
_8433
16797
16798
16799
16800
16801
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-1.5
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.0
-1.3
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.3
-0.3
-1.3
-0.1
+0.1
auxotrophy
Dropout Complete
-0.3
+0.1
-0.0
-0.1
-0.7
auxotrophy
YNB Glucose
-0.2
+0.1
-0.2
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.0
-0.4
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
-0.1
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.3
-0.1
+0.1
-0.3
growth on oleic acid
YNB Glucose
+0.3
-0.3
-0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.2
+0.2
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
-0.0
-0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.1
+0.0
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.0
+0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.3
+0.1
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.0
+0.6
+0.2
-0.7
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.1
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.1
-0.0
+0.1
growth on ypd
YPD
-0.2
+0.1
+0.0
+0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
+0.1
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.0
+0.4
+0.3
+0.3
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